PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0207s0200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 225aa    MW: 24449.2 Da    PI: 10.1856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0207s0200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192070256
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                            +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+ta eAa+a++aa+++++g+
  SapurV1A.0207s0200.1.p 20 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAVEAARAYDAAAREFRGA 70
                            59*******.**********8...557*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.1E-352083IPR001471AP2/ERF domain
PROSITE profilePS5103223.672077IPR001471AP2/ERF domain
PfamPF008472.9E-132069IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-322077IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-222078IPR016177DNA-binding domain
CDDcd000182.68E-212077No hitNo description
PRINTSPR003678.6E-112132IPR001471AP2/ERF domain
PRINTSPR003678.6E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MAPREKPNHS SPNIHGSEIR YRGVRKRPWG RYAAEIRDPG KKTRVWLGTF DTAVEAARAY  60
DAAAREFRGA KAKTNFPTIG ELIPASARSP SQSSTVESSS PPHPRAASPP PRLDLTLNTA  120
HHKTTRHQFP DGAGFPGGAW LPHPAAQRPV FFVDAFAQAR NSSKNRIVNN ISMCMFDRTA  180
MVNGGGAQSD SDSSSVLDYD HHHHDSKGLS LDLDLNFPPP PEVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-192177663ATERF1
3gcc_A7e-192177663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006370222.11e-107Ethylene responsive element binding factor 4 family protein
SwissprotO803406e-46ERF78_ARATH; Ethylene-responsive transcription factor 4
TrEMBLR4TXF91e-112R4TXF9_POPTO; ERF4
STRINGPOPTR_0001s40770.11e-106(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-29ethylene responsive element binding factor 4